STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00004401Uncharacterized protein. (702 aa)    
Predicted Functional Partners:
CCH79_00005306
UBX domain-containing protein.
    
 0.990
ENSGAFP00000032239
Von Hippel-Lindau tumor suppressor.
    
 0.934
CCH79_00019162
Uncharacterized protein.
  
  
 
0.906
ENSGAFP00000007377
Egl-9 family hypoxia-inducible factor 1a.
    
 0.902
ENSGAFP00000015861
E1A binding protein p300 b.
    
 0.898
CCH79_00018061
Uncharacterized protein.
   
 0.895
CCH79_00010821
Uncharacterized protein.
   
0.895
CCH79_00004240
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.893
CCH79_00007730
Fe2OG dioxygenase domain-containing protein.
    
 0.890
CCH79_00001696
JmjC domain-containing protein.
    
 0.882
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.