STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00013568Uncharacterized protein. (210 aa)    
Predicted Functional Partners:
H4C7
H4 clustered histone 7.
   
 0.740
CCH79_00013777
Uncharacterized protein; Belongs to the terpene cyclase/mutase family.
    
 0.717
CCH79_00000714
Uncharacterized protein.
   
 0.713
CCH79_00012553
Uncharacterized protein.
   
 0.707
CCH79_00000140
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.699
ENSGAFP00000032089
Bystin-like.
   
 0.685
CCH79_00007355
Uncharacterized protein.
    
 0.683
ENSGAFP00000017338
annotation not available
    
 0.683
CCH79_00010310
Bms1-type G domain-containing protein.
   
  0.680
CCH79_00015828
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 0.665
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.