STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00000549Uncharacterized protein. (281 aa)    
Predicted Functional Partners:
CCH79_00020512
Tr-type G domain-containing protein.
   
 0.895
ENSGAFP00000022650
Pentatricopeptide repeat domain 3.
    
 0.860
CCH79_00011717
MRP-S28 domain-containing protein.
   
 0.836
CCH79_00001993
Uncharacterized protein.
   
 0.835
CCH79_00010965
Uncharacterized protein.
    
 0.827
CCH79_00018897
Uncharacterized protein.
   
 0.824
CCH79_00013379
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
    
 0.796
CCH79_00012165
Uncharacterized protein.
    
 0.791
CCH79_00001254
Uncharacterized protein.
   
  0.789
CCH79_00018148
Uncharacterized protein.
   
  0.789
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.