STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00017213PKS_ER domain-containing protein. (370 aa)    
Predicted Functional Partners:
ENSGAFP00000010221
Protein phosphatase 1, regulatory subunit 21.
    
   0.919
ENSGAFP00000004580
Sulfite oxidase.
    
 0.894
ENSGAFP00000025571
annotation not available
  
 0.824
ENSGAFP00000029611
annotation not available
  
 0.824
CCH79_00018760
Uncharacterized protein.
  
 
 0.760
CCH79_00016732
Carrier domain-containing protein.
  
0.748
CCH79_00004012
Carrier domain-containing protein.
  
 0.748
CCH79_00004013
Carrier domain-containing protein.
  
 0.748
CCH79_00007313
ATP-synt_DE_N domain-containing protein.
   
 0.732
CCH79_00020409
Fe-ADH domain-containing protein.
    
 0.721
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.