STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000005993Lysine methyltransferase 5Aa. (341 aa)    
Predicted Functional Partners:
CCH79_00004136
Fe2OG dioxygenase domain-containing protein.
    
  0.902
CCH79_00019719
Fe2OG dioxygenase domain-containing protein.
    
  0.900
CCH79_00017899
Fe2OG dioxygenase domain-containing protein.
    
  0.896
H4C7
H4 clustered histone 7.
    
 0.888
ENSGAFP00000002215
Calmodulin-lysine N-methyltransferase.
     
 0.874
CCH79_00007273
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
   
 0.838
CCH79_00016681
SET domain-containing protein.
   
 0.830
ENSGAFP00000002795
Retinoblastoma binding protein 5.
    
 0.823
CCH79_00007041
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
   0.800
CCH79_00014971
PHD-type domain-containing protein.
    
 0.798
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.