STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00002786Homeobox domain-containing protein. (232 aa)    
Predicted Functional Partners:
CCH79_00002787
Homeobox domain-containing protein.
  
  
0.999
CCH79_00014857
Homeobox domain-containing protein.
  
 
0.757
CCH79_00015765
Homeobox domain-containing protein.
  
  
0.734
ENSGAFP00000011518
Homeobox C6a.
   
 
0.730
CCH79_00003343
Uncharacterized protein.
   
 
0.725
CCH79_00015766
Uncharacterized protein.
   
 
0.717
ENSGAFP00000019051
Homeobox B6a.
   
 
0.703
CCH79_00014859
Homeobox domain-containing protein.
   
  
0.701
ENSGAFP00000009632
annotation not available
   
  
0.685
CCH79_00008428
Homeobox domain-containing protein.
  
 
0.669
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.