STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00007311Uncharacterized protein. (248 aa)    
Predicted Functional Partners:
CCH79_00020651
TGF_BETA_2 domain-containing protein.
    
 0.859
CCH79_00020423
TGF_BETA_2 domain-containing protein.
    
 0.859
INHBB
TGF_BETA_2 domain-containing protein.
    
 0.859
ENSGAFP00000005073
Growth differentiation factor 11.
    
 0.849
CCH79_00013781
TGF_BETA_2 domain-containing protein.
    
 0.849
CCH79_00017290
TGF_BETA_2 domain-containing protein.
    
 0.802
CCH79_00009057
Uncharacterized protein.
  
  
0.714
CCH79_00014611
Fam20C domain-containing protein.
     
 0.628
INHBC
Inhibin subunit beta C.
    
 0.578
CCH79_00013661
Fam20C domain-containing protein.
     
 0.570
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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