STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00002405Uncharacterized protein. (229 aa)    
Predicted Functional Partners:
CCH79_00004255
Uncharacterized protein.
    
   0.808
ENSGAFP00000022155
Chaperonin containing TCP1, subunit 7 (eta).
    
   0.663
CCH79_00002137
FERM domain-containing protein.
      
 0.526
SLC25A45
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.519
CCH79_00019492
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
   
 
 0.458
CCH79_00013937
Uncharacterized protein.
    
   0.454
CCH79_00013938
T-complex protein 1 subunit delta; Belongs to the TCP-1 chaperonin family.
    
   0.454
ENSGAFP00000018995
Chaperonin containing TCP1, subunit 3 (gamma).
   
   0.454
CCH79_00016306
DUF3715 domain-containing protein.
   
   0.453
ENSGAFP00000005731
annotation not available
    
   0.451
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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