STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00017665Uncharacterized protein. (407 aa)    
Predicted Functional Partners:
CCH79_00009837
Uncharacterized protein; Belongs to the argonaute family.
   
 0.807
ENSGAFP00000002469
annotation not available
   
 0.802
CCH79_00003033
Uncharacterized protein.
  
 0.787
CCH79_00016596
CS domain-containing protein.
   
 0.768
CCH79_00000105
Peptidylprolyl isomerase.
   
 0.752
ENSGAFP00000001096
Mov10 RISC complex RNA helicase a.
   
 0.716
CCH79_00000751
AAA domain-containing protein.
   
 0.716
CCH79_00014845
Uncharacterized protein.
   
 0.716
ENSGAFP00000002570
annotation not available
   
 0.661
CCH79_00020873
Piwi domain-containing protein.
   
 0.661
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.