STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000006168annotation not available (284 aa)    
Predicted Functional Partners:
ENSGAFP00000022721
annotation not available
 
     0.925
ENSGAFP00000022717
annotation not available
 
      0.899
CCH79_00012911
Uncharacterized protein.
 
      0.894
ENSGAFP00000007617
Translocase of outer mitochondrial membrane 20.
    
 0.796
CCH79_00007750
ARID domain-containing protein.
    
 0.796
ENSGAFP00000003099
annotation not available
   
 0.751
CCH79_00018053
WD_REPEATS_REGION domain-containing protein.
   
 0.748
CCH79_00004609
WD_REPEATS_REGION domain-containing protein.
   
 0.748
CCH79_00015453
Uncharacterized protein.
   
 0.748
CCH79_00010583
Uncharacterized protein; Belongs to the actin family.
    
 0.741
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.