STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00000044Tr-type G domain-containing protein. (702 aa)    
Predicted Functional Partners:
CCH79_00002315
Uncharacterized protein.
    
 0.998
CCH79_00000140
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 
 0.996
CCH79_00017489
eRF1_1 domain-containing protein.
   
 
 0.996
CCH79_00008649
Uncharacterized protein.
    
 0.992
CCH79_00012667
ECR1_N domain-containing protein.
    
 0.991
ENSGAFP00000022627
Exosome component 9.
   
 0.991
ENSGAFP00000023346
Exosome component 5.
    
 0.991
CCH79_00020710
KH_dom_type_1 domain-containing protein.
    
 0.989
CCH79_00000922
Uncharacterized protein.
    
 0.988
CCH79_00005374
Uncharacterized protein.
    
 0.988
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.