STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000006182Connexin 30.3. (252 aa)    
Predicted Functional Partners:
CCH79_00002075
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
  
  
0.767
ENSGAFP00000006405
Connexin 31.7.
  
  
0.766
ENSGAFP00000030904
Connexin 43.
  
 
0.649
ENSGAFP00000026845
Connexin 35.4.
  
 
0.531
ENSGAFP00000025001
annotation not available
  
     0.515
CCH79_00008088
Coronin; Belongs to the WD repeat coronin family.
  
     0.445
CCH79_00010623
ATP-grasp domain-containing protein.
      
 0.426
CCH79_00017198
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
  
 
0.417
ENSGAFP00000031651
Gap junction protein, alpha 5a.
  
 
0.412
ENSGAFP00000024358
annotation not available
  
     0.407
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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