STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00007316Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (237 aa)    
Predicted Functional Partners:
CCH79_00003038
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.955
CCH79_00018145
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.955
CCH79_00013879
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.955
LMNA
Uncharacterized protein; Belongs to the intermediate filament family.
    
 0.953
CASP3
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.948
ENSGAFP00000032179
Poly (ADP-ribose) polymerase family, member 3.
   
 
  0.945
CCH79_00000359
Poly [ADP-ribose] polymerase.
   
  0.925
CCH79_00006512
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
    
  0.922
CCH79_00013398
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
  0.919
CCH79_00007216
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
    
  0.919
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.