Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00019071Uncharacterized protein. (1028 aa)    
Predicted Functional Partners:
CCH79_00007392
Uncharacterized protein.
    
 0.878
CCH79_00015094
Chromo domain-containing protein.
    
 0.765
CCH79_00007090
Uncharacterized protein; Belongs to the actin family.
   
 0.719
ENSGAFP00000019845
Dynactin 2 (p50).
    
 0.716
WDR1
WD repeat domain 1.
   
 0.711
CCH79_00013636
Uncharacterized protein.
    
 0.702
ENSGAFP00000009448
Actin related protein 2/3 complex, subunit 3.
    
 0.695
CCH79_00010562
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
    
 0.695
CCH79_00005934
Uncharacterized protein.
    
 0.687
ENSGAFP00000032225
RuvB-like AAA ATPase 1.
    
 0.687
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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