STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00008348Uncharacterized protein. (604 aa)    
Predicted Functional Partners:
CCH79_00007516
Uncharacterized protein.
    
 
 0.893
CCH79_00008498
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
  
 
 0.893
CCH79_00004068
Ribosomal_L18e/L15P domain-containing protein.
   
   0.886
CCH79_00004826
MRP-L46 domain-containing protein.
    
   0.886
CCH79_00008712
KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family.
   
   0.886
CCH79_00011583
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.886
CCH79_00003291
L51_S25_CI-B8 domain-containing protein.
    
   0.886
CCH79_00007091
Uncharacterized protein.
    
   0.886
ENSGAFP00000026749
Mitochondrial ribosomal protein L21.
    
   0.886
ENSGAFP00000029444
Mitochondrial ribosomal protein L11.
    
   0.886
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.