STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00004132Uncharacterized protein; Belongs to the transient receptor (TC 1.A.4) family. (799 aa)    
Predicted Functional Partners:
CCH79_00002309
ANK_REP_REGION domain-containing protein.
  
 
0.845
CCH79_00012135
ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family.
  
 
0.845
ENSGAFP00000027981
Transient receptor potential cation channel, subfamily C, member 5a.
    
0.842
ENSGAFP00000014255
Stromal interaction molecule 1b.
    
 0.832
CCH79_00010257
SAM domain-containing protein.
    
 0.832
CCH79_00012921
SOAR domain-containing protein.
    
 0.812
CCH79_00012391
SAM domain-containing protein.
    
 0.812
TRPC6-2
ANK_REP_REGION domain-containing protein.
  
 
0.788
TRPC6
ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family.
  
 
0.786
ENSGAFP00000005340
Transient receptor potential cation channel, subfamily C, member 7b.
  
 
0.781
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.