STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000006362ADP-ribosylation factor GTPase activating protein 1. (415 aa)    
Predicted Functional Partners:
CCH79_00018906
Arf-GAP domain-containing protein.
   
0.947
CCH79_00015247
Arf-GAP domain-containing protein.
   
0.947
CCH79_00018314
SEC7 domain-containing protein.
    
 0.881
SMAP1
Arf-GAP domain-containing protein.
    
0.857
CCH79_00008413
Arf-GAP domain-containing protein.
    
0.857
CCH79_00016638
Uncharacterized protein.
   
 0.852
CCH79_00007134
Uncharacterized protein.
   
 0.847
CCH79_00010246
Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.829
CCH79_00017249
Uncharacterized protein.
   
 0.822
CCH79_00008303
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 0.822
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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