STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00012917Alpha-mannosidase. (1014 aa)    
Predicted Functional Partners:
CCH79_00015270
Alpha-mann_mid domain-containing protein.
     
0.947
CCH79_00019493
Uncharacterized protein.
   
 
 0.722
CCH79_00018549
Uncharacterized protein.
   
 
 0.722
CCH79_00000496
Uncharacterized protein; Belongs to the glycosyltransferase 23 family.
     
 0.706
CCH79_00020556
Alpha-mannosidase.
     
0.613
CCH79_00010012
Alpha-mannosidase.
     
0.613
ENSGAFP00000032355
annotation not available
     
0.613
CCH79_00002176
Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family.
   
 
 0.599
CCH79_00005718
Alpha-galactosidase.
   
 
 0.593
CCH79_00000068
Alpha-galactosidase.
   
 
 0.593
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.