STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00008677CaMBD domain-containing protein. (362 aa)    
Predicted Functional Partners:
KCNMB4
Uncharacterized protein.
     
 0.628
ENSGAFP00000025202
Lipoyl(octanoyl) transferase 2.
     
 0.599
CCH79_00011248
Uncharacterized protein.
     
 0.547
ENSGAFP00000030507
Calcium binding protein 4.
   
   0.532
ENSGAFP00000007794
annotation not available
     
 0.506
CCH79_00003117
Uncharacterized protein.
     
 0.506
ENSGAFP00000012620
Si:dkey-21e5.1.
     
 0.506
ENSGAFP00000014849
Potassium large conductance calcium-activated channel, subfamily M, alpha member 1a.
     
 0.506
CCH79_00001059
Uncharacterized protein.
     
 0.506
CCH79_00016831
KcnmB2_inactiv domain-containing protein.
     
 0.501
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.