ENSGAFP00000006435 protein (Gambusia affinis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSGAFP00000006435

annotation not available (204 aa)

Predicted Functional Partners:

CRYAB

0.801

ENSGAFP00000005487

0.792

CCH79_00007079

0.619

ENSGAFP00000006897

0.619

ENSGAFP00000030207

0.619

MAPKAPK3

0.619

CCH79_00019539

0.574

CCH79_00000884

0.555

CCH79_00002187

0.555

ENSGAFP00000001579

0.522

Your Current Organism:

Gambusia affinis

NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCH79_00000884	CCH79_00002187	ENSGAFP00000013386	ENSGAFP00000021893	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	0.952
CCH79_00000884	CCH79_00007079	ENSGAFP00000013386	ENSGAFP00000004780	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	Protein kinase domain-containing protein.	0.985
CCH79_00000884	CCH79_00019539	ENSGAFP00000013386	ENSGAFP00000024425	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	0.811
CCH79_00000884	CRYAB	ENSGAFP00000013386	ENSGAFP00000001801	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	0.890
CCH79_00000884	ENSGAFP00000001579	ENSGAFP00000013386	ENSGAFP00000001579	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	BCL2 associated athanogene 3.	0.774
CCH79_00000884	ENSGAFP00000006435	ENSGAFP00000013386	ENSGAFP00000006435	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	annotation not available	0.555
CCH79_00000884	ENSGAFP00000006897	ENSGAFP00000013386	ENSGAFP00000006897	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	MAPK activated protein kinase 2b.	0.989
CCH79_00000884	ENSGAFP00000030207	ENSGAFP00000013386	ENSGAFP00000030207	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	MAPK activated protein kinase 3.	0.966
CCH79_00000884	MAPKAPK3	ENSGAFP00000013386	ENSGAFP00000032203	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	MAPK activated protein kinase 3.	0.966
CCH79_00002187	CCH79_00000884	ENSGAFP00000021893	ENSGAFP00000013386	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	0.952
CCH79_00002187	CCH79_00007079	ENSGAFP00000021893	ENSGAFP00000004780	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	Protein kinase domain-containing protein.	0.985
CCH79_00002187	CCH79_00019539	ENSGAFP00000021893	ENSGAFP00000024425	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	0.811
CCH79_00002187	CRYAB	ENSGAFP00000021893	ENSGAFP00000001801	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	0.890
CCH79_00002187	ENSGAFP00000001579	ENSGAFP00000021893	ENSGAFP00000001579	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	BCL2 associated athanogene 3.	0.774
CCH79_00002187	ENSGAFP00000006435	ENSGAFP00000021893	ENSGAFP00000006435	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	annotation not available	0.555
CCH79_00002187	ENSGAFP00000006897	ENSGAFP00000021893	ENSGAFP00000006897	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	MAPK activated protein kinase 2b.	0.989
CCH79_00002187	ENSGAFP00000030207	ENSGAFP00000021893	ENSGAFP00000030207	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	MAPK activated protein kinase 3.	0.966
CCH79_00002187	MAPKAPK3	ENSGAFP00000021893	ENSGAFP00000032203	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	MAPK activated protein kinase 3.	0.966
CCH79_00007079	CCH79_00000884	ENSGAFP00000004780	ENSGAFP00000013386	Protein kinase domain-containing protein.	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	0.985
CCH79_00007079	CCH79_00002187	ENSGAFP00000004780	ENSGAFP00000021893	Protein kinase domain-containing protein.	SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.	0.985