STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00007319Rieske domain-containing protein. (134 aa)    
Predicted Functional Partners:
H4C7
H4 clustered histone 7.
   
 
 0.724
CCH79_00005673
TAFII55_N domain-containing protein.
    
 
 0.712
CCH79_00007116
Uncharacterized protein.
    
 
 0.644
CCH79_00002032
TBP-binding domain-containing protein.
    
 
 0.613
CCH79_00020985
JmjC domain-containing protein.
    
 
 0.605
CCH79_00019146
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.603
ENSGAFP00000032225
RuvB-like AAA ATPase 1.
    
 
 0.554
CCH79_00002203
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 
 0.550
ENSGAFP00000005118
annotation not available
    
 
 0.542
ENSGAFP00000032243
Cereblon.
    
 
 0.534
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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