STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00013936Importin N-terminal domain-containing protein. (935 aa)    
Predicted Functional Partners:
CCH79_00012612
GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.989
CCH79_00000966
Nup214_FG domain-containing protein.
    
 0.989
ENSGAFP00000004990
annotation not available
 
  
  0.980
ENSGAFP00000028987
Nucleoporin 88.
    
 0.978
CCH79_00002878
Uncharacterized protein.
   
 
 0.938
CCH79_00008415
Uncharacterized protein.
     
 0.920
CCH79_00011749
IBB domain-containing protein.
    
 
 0.918
CCH79_00009783
Uncharacterized protein.
   
 0.906
ENSGAFP00000009462
RAN binding protein 1.
   
 
 0.891
CCH79_00001409
Importin N-terminal domain-containing protein.
  
  
 
0.883
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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