STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00009783Uncharacterized protein. (931 aa)    
Predicted Functional Partners:
CCH79_00002878
Uncharacterized protein.
   
 0.992
ENSGAFP00000009462
RAN binding protein 1.
   
 0.991
CCH79_00017429
Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.
   
 0.984
CCH79_00019822
Importin N-terminal domain-containing protein.
   
 0.983
CCH79_00001678
Importin N-terminal domain-containing protein.
    
 0.981
CCH79_00007539
Uncharacterized protein.
   
 0.974
CCH79_00016382
RanGAP1_C domain-containing protein.
   
 0.963
CCH79_00013705
RanGAP1_C domain-containing protein.
   
 0.963
CCH79_00008801
Uncharacterized protein.
    
 0.959
CCH79_00013158
Uncharacterized protein.
   
 
 0.943
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.