STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000006550annotation not available (83 aa)    
Predicted Functional Partners:
CCH79_00000966
Nup214_FG domain-containing protein.
    
 0.961
CCH79_00002878
Uncharacterized protein.
   
 
 0.938
CCH79_00012612
GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.896
CCH79_00009783
Uncharacterized protein.
   
 0.896
ENSGAFP00000009462
RAN binding protein 1.
   
 
 0.891
CCH79_00011749
IBB domain-containing protein.
    
 
 0.884
ENSGAFP00000028987
Nucleoporin 88.
    
 0.843
CCH79_00011850
Peptidase S59 domain-containing protein.
    
 0.833
CCH79_00011849
Nup96 domain-containing protein.
    
 0.833
CCH79_00013936
Importin N-terminal domain-containing protein.
 
     0.775
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: medium (58%) [HD]