STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00007325Uncharacterized protein. (496 aa)    
Predicted Functional Partners:
CCH79_00001569
BTB domain-containing protein.
      
 0.584
CCH79_00009529
Uncharacterized protein.
      
 0.553
CCH79_00016733
Uncharacterized protein.
      
 0.543
CCH79_00009709
RHD domain-containing protein.
      
 0.482
CCH79_00013575
DNA polymerase.
      
 0.479
CCH79_00000575
Uncharacterized protein.
      
 0.479
CCH79_00019052
Rhomboid domain-containing protein.
      
 0.477
CCH79_00007816
Rhodanese domain-containing protein.
      
 0.452
CCH79_00018802
Uncharacterized protein.
      
 0.431
CCH79_00018470
Uncharacterized protein.
      
 0.431
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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