STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00003094WD_REPEATS_REGION domain-containing protein. (1208 aa)    
Predicted Functional Partners:
ENSGAFP00000021548
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.996
CCH79_00002484
Uncharacterized protein.
   
 0.989
CCH79_00012756
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.988
CCH79_00005593
Uncharacterized protein.
   
 0.988
ENSGAFP00000017172
annotation not available
   
 0.981
CCH79_00007764
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.981
CCH79_00002483
Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.979
CCH79_00001704
Uncharacterized protein.
   
 0.976
CCH79_00003101
Uncharacterized protein.
   
 0.974
CCH79_00001195
WD_REPEATS_REGION domain-containing protein.
  
  
0.970
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.