STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00016841PHB domain-containing protein. (306 aa)    
Predicted Functional Partners:
CCH79_00008295
PHB domain-containing protein.
  
0.997
CCH79_00002191
Uncharacterized protein.
   
 0.942
CCH79_00014359
Uncharacterized protein; Belongs to the peptidase M16 family.
  
 0.937
CCH79_00013580
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 0.888
CCH79_00005034
AAA domain-containing protein.
  
 0.883
CCH79_00010470
AAA domain-containing protein.
  
 0.852
CCH79_00017643
AAA domain-containing protein; Belongs to the AAA ATPase family.
  
 0.852
CCH79_00020369
AAA domain-containing protein.
  
 0.852
ENSGAFP00000009624
Mitochondrial calcium uptake 1.
    
 0.847
CCH79_00002254
Uncharacterized protein.
    
 0.823
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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