STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00007328Uncharacterized protein. (130 aa)    
Predicted Functional Partners:
CCH79_00017945
Uncharacterized protein.
   
 
 0.832
ENSGAFP00000021490
Biogenesis of lysosomal organelles complex-1, subunit 1.
   
 
 0.792
CCH79_00007399
Uncharacterized protein.
   
 
 0.743
CCH79_00012347
KxDL domain-containing protein.
   
 
 0.725
CCH79_00011823
Uncharacterized protein.
    
 
 0.713
ENSGAFP00000002379
BLOC-1 related complex subunit 7.
    
 
 0.709
CCH79_00020009
Uncharacterized protein.
    
 
 0.705
CCH79_00017420
BZIP domain-containing protein.
    
 
 0.604
ENSGAFP00000022627
Exosome component 9.
      
 0.543
CCH79_00017110
SF3b1 domain-containing protein.
      
 0.525
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.