STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00013175BTB domain-containing protein. (531 aa)    
Predicted Functional Partners:
CCH79_00002878
Uncharacterized protein.
   
 0.681
CCH79_00001659
Uncharacterized protein.
    
 0.657
CCH79_00003710
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.637
CCH79_00005254
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.637
CCH79_00019068
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.627
CCH79_00012918
Uncharacterized protein.
   
 0.602
CCH79_00012392
Uncharacterized protein.
   
 0.602
ENSGAFP00000022473
Recombination signal binding protein for immunoglobulin kappa J region-like.
   
 0.602
H4C7
H4 clustered histone 7.
   
  0.586
CCH79_00012612
GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.579
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.