STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00013176Uncharacterized protein. (509 aa)    
Predicted Functional Partners:
CCH79_00004081
Thymidylat_synt domain-containing protein.
  
 
 0.906
CCH79_00012709
Thymidine kinase.
  
 
 0.905
CCH79_00000373
Uncharacterized protein.
  
 0.816
CCH79_00020045
AB hydrolase-1 domain-containing protein.
  
 
  0.812
TYMP
PYNP_C domain-containing protein.
    
 0.771
CCH79_00019605
Uncharacterized protein.
    
 0.771
CCH79_00007659
Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis.
     
 0.769
CCH79_00002839
Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis.
     
 0.769
ENSGAFP00000011626
annotation not available
    
 0.760
CCH79_00015152
Thymidylate_kin domain-containing protein.
    
 0.760
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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