STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00017441VIT domain-containing protein. (864 aa)    
Predicted Functional Partners:
COQ3
Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.
   
 0.856
CCH79_00017733
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 0.722
CCH79_00005073
PKS_ER domain-containing protein.
  
 
 0.715
CCH79_00020729
Metallophos domain-containing protein; Belongs to the 5'-nucleotidase family.
    
 0.713
CCH79_00003659
Uncharacterized protein.
    
  0.702
CCH79_00018800
Amino_oxidase domain-containing protein.
  
 
 0.698
ENSGAFP00000013451
annotation not available
  
 
 0.698
ENSGAFP00000030340
annotation not available
 
 
0.659
CCH79_00009555
SERPIN domain-containing protein; Belongs to the serpin family.
   
 
 0.654
ENSGAFP00000017984
HemK methyltransferase family member 1.
    
  0.642
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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