STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000007079annotation not available (91 aa)    
Predicted Functional Partners:
CCH79_00020797
RRM domain-containing protein.
   
 
 0.981
CCH79_00001617
NUC173 domain-containing protein.
   
 
 0.973
CCH79_00009210
Uncharacterized protein.
   
 
 0.972
CCH79_00004424
Uncharacterized protein.
   
 
 0.971
CCH79_00019700
CBF domain-containing protein.
   
 
 0.970
CCH79_00019198
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
 0.968
CCH79_00009777
OBG-type G domain-containing protein.
   
 
 0.962
CCH79_00010670
Uncharacterized protein.
   
 
 0.961
CCH79_00009462
Uncharacterized protein.
   
 
 0.959
CCH79_00012744
Uncharacterized protein.
   
 0.959
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.