STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00013241SCY domain-containing protein. (95 aa)    
Predicted Functional Partners:
CCH79_00001603
SCY domain-containing protein.
   
 0.978
ENSGAFP00000025038
Chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1).
   
 0.978
ENSGAFP00000032587
annotation not available
    
 0.971
CCH79_00005525
Uncharacterized protein.
    
 
 0.965
ENSGAFP00000028865
Chemokine (C-C motif) receptor 6b.
   
 0.931
ENSGAFP00000005297
annotation not available
   
 0.897
ENSGAFP00000030083
Chemokine (C-X-C motif) receptor 5.
    
 0.890
ENSGAFP00000015847
Chemokine (C-C motif) receptor 10.
    
 0.878
CCH79_00007471
Uncharacterized protein; Belongs to the G-protein coupled receptor 1 family.
    
 0.875
CCH79_00004129
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
   
 0.875
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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