STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GOT1Aspartate aminotransferase. (409 aa)    
Predicted Functional Partners:
CCH79_00010451
Aspartate aminotransferase.
  
0.991
CCH79_00007442
Malate dehydrogenase.
   
 0.990
CCH79_00013927
Malate dehydrogenase.
   
 0.989
CCH79_00015798
Malate dehydrogenase.
   
 0.989
CCH79_00019172
Uncharacterized protein; Belongs to the aldehyde dehydrogenase family.
  
 0.978
CCH79_00003162
ELFV_dehydrog domain-containing protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.976
CCH79_00004275
Aminotran_1_2 domain-containing protein.
  
 0.974
CCH79_00005435
Aminotran_1_2 domain-containing protein.
  
 0.974
CCH79_00019327
L-lactate dehydrogenase.
   
 0.973
CCH79_00016312
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
   
 0.973
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.