STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00019857Uncharacterized protein. (181 aa)    
Predicted Functional Partners:
CCH79_00009360
Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.
   
    0.829
BRK1
BRICK1 subunit of SCAR/WAVE actin nucleating complex.
   
    0.650
CCH79_00016157
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
    0.562
CCH79_00001439
Uncharacterized protein.
      
 0.544
CCH79_00009849
Uncharacterized protein.
      
 0.536
ENSGAFP00000014828
SFI1 centrin binding protein.
      
 0.522
CCH79_00019387
V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
   
    0.520
CCH79_00007134
Uncharacterized protein.
   
    0.517
ENSGAFP00000017954
Zinc finger, MYND-type containing 10.
      
 0.504
CCH79_00001435
Ribosomal_L2_C domain-containing protein.
   
  
 0.496
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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