STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00015677Uncharacterized protein. (797 aa)    
Predicted Functional Partners:
CCH79_00015738
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.952
CCH79_00000992
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.944
CCH79_00000152
Aldedh domain-containing protein.
   
0.940
ENSGAFP00000018689
annotation not available
  
 0.940
CCH79_00004507
Aldedh domain-containing protein.
   
0.940
ACSF3
AMP-binding domain-containing protein.
  
 0.937
CCH79_00014951
Uncharacterized protein.
  
 0.934
CCH79_00009892
CN hydrolase domain-containing protein.
  
 0.933
CCH79_00009158
Uncharacterized protein.
  
 0.933
CCH79_00017092
Acetyl-coenzyme A synthetase.
  
 0.929
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.