STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00019859Uncharacterized protein. (155 aa)    
Predicted Functional Partners:
CCH79_00003829
Uncharacterized protein.
   
 0.970
SGO1
Shugoshin_C domain-containing protein.
    
 0.959
CCH79_00002478
Serine/threonine-protein phosphatase.
    
 0.926
CCH79_00016202
Serine/threonine-protein phosphatase.
    
 0.926
CCH79_00005989
Serine/threonine-protein phosphatase.
    
 0.894
PPP1R1A
Protein phosphatase 1 regulatory inhibitor subunit 1A.
     
 0.875
CCH79_00011625
Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.
  
 
0.867
CCH79_00019007
Uncharacterized protein.
    
 0.847
CCH79_00004596
BUB1 N-terminal domain-containing protein.
    
 0.847
CCH79_00000472
Uncharacterized protein.
  
0.844
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.