STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00019092Ribosomal protein S6 kinase. (734 aa)    
Predicted Functional Partners:
ENSGAFP00000006577
Mitogen-activated protein kinase 1.
   
0.975
CCH79_00015081
BZIP domain-containing protein.
     
 0.953
CCH79_00013591
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
0.952
CCH79_00012676
Uncharacterized protein.
    
 0.941
ENSGAFP00000004519
TSC complex subunit 1b.
    
 0.922
CCH79_00013528
Rab-GAP TBC domain-containing protein.
     
 0.915
CCH79_00005850
Uncharacterized protein.
  
  
 
0.889
CCH79_00004360
Uncharacterized protein.
  
  
 
0.889
CCH79_00016107
Uncharacterized protein.
    
 0.863
ENSGAFP00000012827
Syntaxin 18.
    
 0.852
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.