STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00008358Uncharacterized protein. (207 aa)    
Predicted Functional Partners:
CCH79_00003287
Uncharacterized protein.
   
 0.983
CCH79_00003346
Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.
    
 0.979
CCH79_00002272
GLUE N-terminal domain-containing protein.
    
 0.966
CCH79_00003349
Uncharacterized protein.
   
 0.945
CCH79_00004434
Uncharacterized protein.
    
 0.939
CCH79_00010178
Uncharacterized protein; Belongs to the AAA ATPase family.
    
 0.931
CCH79_00004095
Uncharacterized protein.
    
0.926
CCH79_00011211
Uncharacterized protein; Belongs to the AAA ATPase family.
    
 0.925
VPS4B
Uncharacterized protein; Belongs to the AAA ATPase family.
    
 0.925
CCH79_00010575
Uncharacterized protein.
    
0.913
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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