STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000007303Ubiquitin protein ligase E3 component n-recognin 2. (1515 aa)    
Predicted Functional Partners:
ENSGAFP00000008603
Thyroid hormone receptor interactor 12.
   
 0.992
ENSGAFP00000011060
annotation not available
   
 0.808
ENSGAFP00000021072
Ribosomal protein S27a.
   
 0.771
CCH79_00005712
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.739
CCH79_00002479
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.739
CCH79_00002654
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.739
ENSGAFP00000006885
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.660
CCH79_00001659
Uncharacterized protein.
   
 0.649
CCH79_00001849
RING-type domain-containing protein.
   
 0.647
ENSGAFP00000005310
annotation not available
   
 0.619
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: low (28%) [HD]