STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00000062G-patch domain-containing protein. (526 aa)    
Predicted Functional Partners:
DHX15
Uncharacterized protein.
    
 0.935
CCH79_00019485
RNA helicase.
    
 0.935
CCH79_00020780
RNA helicase.
    
 0.930
ENSGAFP00000005207
PIN2 (TERF1) interacting telomerase inhibitor 1.
    
 
 0.920
CCH79_00006805
Nucleolar protein 6.
   
 
 0.917
CCH79_00012432
Uncharacterized protein.
    
 
 0.914
ENSGAFP00000032089
Bystin-like.
    
 
 0.914
CCH79_00011676
Uncharacterized protein.
    
 0.913
CCH79_00004111
MI domain-containing protein.
   
   0.910
CCH79_00011226
Ribosomal_S4 domain-containing protein.
    
   0.910
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.