STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00013587Uncharacterized protein. (371 aa)    
Predicted Functional Partners:
CCH79_00004240
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.868
CUL5
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.782
ENSGAFP00000022652
annotation not available
    
 0.782
CCH79_00002477
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.757
CCH79_00003696
RING-type domain-containing protein.
    
 0.708
CCH79_00008099
Ubiquitin-like domain-containing protein.
    
 0.695
ELOB
Ubiquitin-like domain-containing protein.
    
 0.695
CCH79_00002554
Uncharacterized protein.
    
 
 0.626
ENSGAFP00000031458
annotation not available
    
 
 0.626
ENSGAFP00000031459
annotation not available
    
 
 0.626
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.