STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000007460SPARC-like 1. (573 aa)    
Predicted Functional Partners:
CCH79_00004324
Uncharacterized protein.
   
   0.652
CCH79_00013205
Uncharacterized protein.
   
    0.607
ENSGAFP00000003212
annotation not available
     
 0.554
CCH79_00007374
Fam20C domain-containing protein.
     
 0.554
CCH79_00016757
Fam20C domain-containing protein.
     
 0.554
ENSGAFP00000026957
annotation not available
      
 0.540
CCH79_00009594
SAM domain-containing protein.
     
 0.535
CCH79_00004341
Uncharacterized protein.
   
 
  0.531
CCH79_00000447
Vitellogenin domain-containing protein.
   
 
  0.531
ENSGAFP00000020432
annotation not available
   
 
  0.531
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.