STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00009799TPR_REGION domain-containing protein. (2087 aa)    
Predicted Functional Partners:
CCH79_00007326
MADS-box domain-containing protein.
    
 
 0.962
CCH79_00015052
Uncharacterized protein.
   
 0.961
ENSGAFP00000023872
annotation not available
    
 0.932
ENSGAFP00000023876
annotation not available
    
 0.932
CCH79_00014286
Uncharacterized protein.
    
 0.929
CCH79_00008124
Uncharacterized protein.
    
 0.907
CCH79_00000140
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.889
MEF2D
MADS-box domain-containing protein.
    
 
 0.712
ENSGAFP00000017179
Myocyte enhancer factor 2d.
    
 
 0.712
ENSGAFP00000008928
Fraser extracellular matrix complex subunit 1.
    
 0.681
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.