STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00000576NFACT-R_1 domain-containing protein. (219 aa)    
Predicted Functional Partners:
CCH79_00001352
EF-hand domain-containing protein.
    
 0.713
ENSGAFP00000013841
annotation not available
    
 0.713
CCH79_00012673
Uncharacterized protein.
    
 0.713
CCH79_00005774
Uncharacterized protein.
    
 0.713
CCH79_00009178
Uncharacterized protein.
    
 0.713
ENSGAFP00000025538
Polycystic kidney disease 1 like 2a.
    
 0.713
CCH79_00002977
Uncharacterized protein.
    
 0.713
CCH79_00001173
Tubulin-specific chaperone A; Belongs to the TBCA family.
   
    0.612
IWS1
TFIIS N-terminal domain-containing protein.
      
 0.580
ENSGAFP00000031850
Si:ch211-190p8.2.
    
   0.545
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.