STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00000069PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (214 aa)    
Predicted Functional Partners:
CCH79_00011188
Ig-like domain-containing protein.
    
 0.948
ENSGAFP00000008665
Fms-related tyrosine kinase 4.
    
 0.940
CCH79_00005642
Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
    
 0.940
CCH79_00004190
Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.936
ENSGAFP00000012978
Platelet-derived growth factor receptor, beta polypeptide.
    
 0.931
CCH79_00011185
Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.930
ENSGAFP00000010552
annotation not available
    
 0.922
ENSGAFP00000012200
KIT proto-oncogene, receptor tyrosine kinase b.
    
 0.916
ENSGAFP00000012937
Colony stimulating factor 1 receptor, a.
    
 0.916
CCH79_00011186
Ig-like domain-containing protein.
    
 0.916
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.