STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00000577Uncharacterized protein. (621 aa)    
Predicted Functional Partners:
CCH79_00014241
SMC hinge domain-containing protein.
   
 0.986
CCH79_00012405
SMC hinge domain-containing protein.
   
 0.918
CCH79_00009334
Uncharacterized protein.
   
 0.914
CCH79_00003918
SMC hinge domain-containing protein.
   
 0.909
CCH79_00007041
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.900
CCH79_00010720
Uncharacterized protein.
   
 0.896
CCH79_00002328
Uncharacterized protein.
   
 0.884
ENSGAFP00000031041
annotation not available
   
 0.884
ENSGAFP00000016675
annotation not available
   
 0.880
CCH79_00010761
SMC hinge domain-containing protein.
   
 0.880
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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