Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00000577Uncharacterized protein. (621 aa)    
Predicted Functional Partners:
CCH79_00014241
SMC hinge domain-containing protein.
   
 0.983
CCH79_00007041
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.940
CCH79_00002328
Uncharacterized protein.
    
 0.927
ENSGAFP00000031041
annotation not available
    
 0.927
CCH79_00009334
Uncharacterized protein.
    
 0.919
CCH79_00014578
AAA domain-containing protein.
   
 0.918
CCH79_00018449
AAA domain-containing protein.
   
 
 0.914
CCH79_00007455
Uncharacterized protein.
   
 0.911
CCH79_00006488
Uncharacterized protein.
   
 0.911
RAD21
Uncharacterized protein.
   
 0.911
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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