STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000007828annotation not available (575 aa)    
Predicted Functional Partners:
CCH79_00007392
Uncharacterized protein.
    
  0.530
ENSGAFP00000007617
Translocase of outer mitochondrial membrane 20.
    
 0.529
CCH79_00007750
ARID domain-containing protein.
    
 0.529
CCH79_00016640
Guanylate kinase-like domain-containing protein.
    
 0.474
ENSGAFP00000023775
annotation not available
    
 0.460
CCH79_00016885
Uncharacterized protein.
   
  0.456
ENSGAFP00000013954
SMC5-SMC6 complex localization factor 1.
   
 0.452
CCH79_00002878
Uncharacterized protein.
    
 0.451
CCH79_00015139
Uncharacterized protein.
   
  0.444
ENSGAFP00000030850
annotation not available
   
  0.414
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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