STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00019129Uncharacterized protein. (2444 aa)    
Predicted Functional Partners:
ENSGAFP00000007177
Intersectin 2a.
   
 
 
0.983
CCH79_00006118
Uncharacterized protein.
   
 
  0.983
ENSGAFP00000012493
Intersectin 2b.
   
 
 
0.983
ENSGAFP00000024193
annotation not available
 
 
0.964
CCH79_00013879
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.920
CASP3
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.920
CCH79_00019876
Uncharacterized protein.
   
0.917
ENSGAFP00000005374
annotation not available
   
0.917
CCH79_00001970
Spectrin beta chain; Belongs to the spectrin family.
   
0.917
ENSGAFP00000005786
annotation not available
 
 
 0.917
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.