STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00013212Uncharacterized protein. (654 aa)    
Predicted Functional Partners:
PTPRD
Uncharacterized protein.
   
 0.838
PTPRD-2
Uncharacterized protein.
   
 0.838
CCH79_00005177
Uncharacterized protein.
   
 0.834
CCH79_00013489
Uncharacterized protein.
   
 0.834
CCH79_00009629
Uncharacterized protein.
   
 0.834
CCH79_00003185
Uncharacterized protein.
    
 0.772
CCH79_00001757
Uncharacterized protein.
    
 0.772
ENSGAFP00000030517
Protein tyrosine phosphatase receptor type A.
    
 0.772
ENSGAFP00000010254
annotation not available
    
 0.756
PTK7
Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.619
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.